postf (Danaher Inc)
Structured Review

Postf, supplied by Danaher Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/postf/product/Danaher Inc
Average 86 stars, based on 1 article reviews
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1) Product Images from "Structural basis for potent neutralization of human respirovirus type 3 by protective single-domain camelid antibodies"
Article Title: Structural basis for potent neutralization of human respirovirus type 3 by protective single-domain camelid antibodies
Journal: Nature Communications
doi: 10.1038/s41467-024-49757-1
Figure Legend Snippet: a Cartoon representation of the RV3 preF protomer (left) colored according to the linear schematic below, and the trimer (right) with additional protomers shown as gray surface representations. DI–DIII Domains I–III, HRA–HRC Heptad Repeat A–C, FP Fusion peptide. b Three llamas were immunized with recombinant RV3 prefusion F (preF) according to the schedule shown. c Serum titers from the three immunized llamas before (day 0) and after completion of the immunization protocol (day 43), tested for binding to preF or postfusion F (postF). d After two rounds of phage-display panning, a selection of clones was tested by ELISA for binding to purified RV3 preF, postF, and a GCN4 peptide. Results are shown with a color gradient: high levels of binding indicated by yellow and low binding indicated by navy blue. e Off-rate analysis results for a selection of clones that bound preF or both pre- and postF, selected based on the results from d . 39 clones, represented as orange points, were selected for further characterization. Source data are provided within the Source Data file. Figure b created with BioRender.com released under a Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International license.
Techniques Used: Recombinant, Binding Assay, Selection, Clone Assay, Enzyme-linked Immunosorbent Assay, Purification
Figure Legend Snippet: a Half-maximal inhibitory concentration (IC 50 ) values for 16 potently neutralizing VHH candidates determined by neutralization assays performed with recombinant RV3-eGFP virus. Points represent geometric means of biological replicates ( n = 2 for 2B03, 3A02, 3E06, 4E07, 5D03, 5E03, 6B02, and 6B03; n = 3 for 1A03, 1H09, 2E10, 2H02, 4C03, and 4C06; n = 4 for 1D10 and 3B04) ±geometric standard deviations. Representative curves are displayed in Supplementary Fig. and numeric IC 50 values are listed in Supplementary Table . b ELISA binding curves for the top 13 VHH candidates. VHHs were tested for binding to RV3 preF (left) and postF (right). Half maximal effective concentration (EC 50 ) values are listed in Supplementary Table . c Competition matrix indicating the level of binding observed for each of the 13 top VHH candidates to preF saturated with the same VHH or a different VHH from the same pool. Columns indicate the competition profile of each VHH. Each epitope bin is outlined based on the representative VHH that was selected for further characterization, colored as in a and b . d Sequence alignment of the representative VHH selected from each epitope bin. VHHs 4C06, 1H09, and 1D10 are aligned to the 4C03 sequence. IMGT-based residue numbers are represented by blue text. Invariant residues are indicated by black dots. Complementarity determining regions (CDRs) are indicated by boxes. e Surface plasmon resonance sensorgrams for binding of each representative VHH to preF. Binding curves are colored black. Data fit to a 1:1 binding model is colored by VHH according to a and b . Source data are provided within the Source Data file.
Techniques Used: Concentration Assay, Neutralization, Recombinant, Virus, Enzyme-linked Immunosorbent Assay, Binding Assay, Sequencing, Residue, SPR Assay
Figure Legend Snippet: a Cryo-EM map of 1D10 and 4C06 bound to preF shown in top-down and side views, structure shown in bottom-down view. 1D10 is colored red, 4C06 is colored yellow, and each protomer of preF is colored a shade of blue. b (center) The preF trimer is represented as light colored surface, with each protomer a different shade of blue. The 1D10 epitope is opaque and colored according to domain as in Fig. . DI is colored green and DII is colored dark turquoise. Insets are zoomed-in views of the interface between 1D10 and preF. (left, top) A small interprotomer interface at the central cavity of preF is contacted by CDR3 of 1D10. Oxygen atoms are colored red, nitrogen atoms are colored blue, hydrogen bonds and salt bridges are shown as blue dashes. (left, bottom) Important residues involved at the interface between 1D10 and DI and DII of one protomer, shown as sticks. (right, top) The entire concave surface of 1D10 participates in contacts with DI. 1D10 contact residues here are shown as spheres. (right, bottom) 1D10 forms a large network of hydrogen bonds and salt bridges throughout DI of one protomer. c (left) 1D10 (red) bound to a single preF protomer, shown as cartoons colored by domain. (right) Model of 1D10 bound to a postF protomer (PDBID: 1ZTM). Modeling and calculations were performed in ChimeraX. DI of the preF protomer bound to 1D10 was aligned to DI of the postF protomer. RMSD: 1.6 Å. d Model of 1D10 bound to the postF trimer. Zoomed-in view shows the interface between 1D10 and postF, showing clashes within the DI/DII linker. Clashes are shown as purple dashes, defined by atomic distances of <0.6 Å.
Techniques Used: Cryo-EM Sample Prep


